Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000222.1 Corchorus capsularis cultivar CVL-1 contig00222, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5444

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
392--429
20
1.9
20
88
0
58
60
5
2
31
1.33
435--586
74
2.1
74
92
2
252
38
9
29
22
1.85
639--735
51
1.9
51
89
4
151
40
7
8
44
1.62
893--955
32
2.0
32
84
9
85
31
30
9
28
1.89
1314--1350
5
7.4
5
96
0
65
40
35
21
2
1.68
1435--1460
12
2.2
12
100
0
52
50
0
0
50
1.00
1599--1641
20
2.1
21
86
4
61
20
18
20
39
1.93

Tables:   1

The End!