Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002326.1 Corchorus capsularis cultivar CVL-1 contig02332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1229

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
740--814
15
4.7
16
85
8
91
38
5
1
54
1.31
761--832
32
2.2
32
80
4
74
41
5
1
51
1.34
831--926
14
6.9
13
71
20
70
45
2
3
48
1.29
845--969
16
8.0
16
72
16
68
44
1
3
50
1.27
828--936
25
4.6
25
76
17
115
44
1
2
50
1.26
898--971
28
2.5
30
75
14
73
45
1
2
50
1.24
964--997
15
2.3
15
94
0
59
50
5
0
44
1.26
977--1034
27
2.0
29
87
9
84
58
1
3
36
1.25
1106--1172
26
2.6
26
97
0
125
62
8
1
26
1.33
1179--1214
18
2.0
18
100
0
72
50
0
16
33
1.46

Tables:   1

The End!