Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002356.1 Corchorus capsularis cultivar CVL-1 contig02362, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1042

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
499--571
13
5.6
13
76
23
82
26
31
27
15
1.95
492--597
52
2.1
51
89
8
162
27
32
27
13
1.94
492--574
26
3.2
26
100
0
166
26
32
25
15
1.96
503--652
26
5.3
26
81
16
92
27
30
29
13
1.94
562--652
32
2.8
32
91
6
157
28
29
30
10
1.91
871--1024
77
2.0
77
85
2
211
35
19
24
20
1.96

Tables:   1

The End!