Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000239.1 Corchorus capsularis cultivar CVL-1 contig00239, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10450

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1764--1795
2
16.0
2
100
0
64
50
0
0
50
1.00
2687--2714
2
14.0
2
100
0
56
50
0
50
0
1.00
3287--3315
4
7.2
4
100
0
58
24
0
0
75
0.80
4480--4513
17
2.0
17
88
0
50
58
0
5
35
1.22
5664--5700
2
20.0
2
84
15
53
54
0
0
45
1.00
6794--6839
23
2.0
23
100
0
92
56
4
8
30
1.49

Tables:   1

The End!