Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000251.1 Corchorus capsularis cultivar CVL-1 contig00251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1142

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--146
26
2.6
26
84
9
93
35
1
8
54
1.41
49--140
13
7.1
13
67
24
52
34
1
7
56
1.35
155--214
25
2.5
25
86
5
79
43
0
20
36
1.52
397--430
2
17.0
2
100
0
68
0
50
0
50
1.00
914--956
22
2.0
22
95
0
77
58
11
4
25
1.52

Tables:   1

The End!