Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002557.1 Corchorus capsularis cultivar CVL-1 contig02565, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1003

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
195--228
15
2.3
15
89
0
50
14
8
0
76
1.01
498--742
30
7.4
30
75
19
204
28
9
8
53
1.62
501--579
15
5.3
15
68
0
68
29
8
7
54
1.59
558--762
40
5.6
39
82
15
251
27
9
8
53
1.63
528--762
70
3.3
69
78
12
262
28
9
8
53
1.63
637--733
34
3.1
31
88
10
151
29
10
7
52
1.62
528--762
104
2.2
105
92
5
384
28
9
8
53
1.63

Tables:   1

The End!