Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000267.1 Corchorus capsularis cultivar CVL-1 contig00267, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1626

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
482--641
47
3.4
47
93
0
268
47
9
20
23
1.78
530--608
26
3.2
26
67
29
82
51
8
15
24
1.71
673--738
31
2.1
31
88
8
98
48
6
18
27
1.71
856--904
21
2.3
22
79
10
57
61
4
18
16
1.50
898--980
35
2.4
35
81
0
94
50
9
19
20
1.75
964--1051
21
4.1
21
75
10
72
47
7
23
20
1.76
1065--1144
22
3.7
21
80
8
81
55
6
18
20
1.64

Tables:   1

The End!