Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002682.1 Corchorus capsularis cultivar CVL-1 contig02690, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1266

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
650--701
27
2.0
26
85
7
70
32
3
0
63
1.12
909--943
18
1.9
18
88
0
52
5
11
40
42
1.65
1151--1193
22
2.0
22
100
0
86
55
0
6
37
1.27
1215--1256
7
6.3
7
81
10
52
50
0
2
47
1.14
1210--1251
20
2.2
19
91
4
66
45
0
2
52
1.13
1123--1253
22
6.1
22
71
19
66
47
0
5
47
1.25

Tables:   1

The End!