Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000271.1 Corchorus capsularis cultivar CVL-1 contig00271, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1098

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--276
22
12.9
22
73
13
186
16
20
6
56
1.63
243--354
21
5.1
22
79
13
124
19
17
5
57
1.59
243--389
66
2.2
64
83
8
172
19
18
6
56
1.62
575--777
54
3.8
53
82
11
240
24
15
7
52
1.68
575--777
105
1.9
106
90
4
327
24
15
7
52
1.68
765--822
22
2.7
21
81
5
62
20
22
8
48
1.77

Tables:   1

The End!