Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000272.1 Corchorus capsularis cultivar CVL-1 contig00272, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8417

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95--132
19
2.0
20
85
15
53
63
2
5
28
1.30
4872--4907
2
18.0
2
100
0
72
50
0
0
50
1.00
7463--7521
23
2.5
22
74
15
57
45
5
1
47
1.34
8322--8393
29
2.4
29
88
2
90
13
26
27
31
1.94
8327--8393
30
2.3
29
89
2
98
13
26
26
32
1.94

Tables:   1

The End!