Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002794.1 Corchorus capsularis cultivar CVL-1 contig02802, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1623

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1129--1176
13
3.6
13
73
15
53
12
25
0
62
1.30
1250--1331
21
3.9
21
79
7
94
21
15
7
54
1.65
1237--1347
42
2.6
42
74
14
111
21
19
7
51
1.71
1411--1453
16
2.6
16
89
10
61
13
27
2
55
1.51
1444--1550
40
2.7
38
81
12
119
23
21
4
50
1.67
1444--1551
39
2.8
39
82
12
116
23
21
4
50
1.66

Tables:   1

The End!