Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002801.1 Corchorus capsularis cultivar CVL-1 contig02809, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7406

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3725--3830
2
59.0
2
70
20
65
57
1
0
40
1.09
3725--3822
18
5.6
17
79
13
85
58
2
0
39
1.10
3731--3830
29
3.5
30
76
16
74
58
2
0
40
1.10
3764--3830
31
2.1
32
88
2
100
58
1
0
40
1.07
4140--4195
21
2.8
20
76
15
69
35
10
16
37
1.83
4260--4318
23
2.6
22
86
7
75
37
5
15
42
1.69
4483--4525
23
1.9
22
85
4
59
51
9
9
30
1.65
4552--4613
22
2.8
22
80
7
63
41
8
14
35
1.75
5053--5094
8
5.5
8
83
8
52
38
0
0
61
0.96

Tables:   1

The End!