Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002842.1 Corchorus capsularis cultivar CVL-1 contig02850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1184

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--80
37
1.9
37
85
5
99
50
7
15
26
1.69
392--898
7
70.9
7
68
12
151
54
4
22
19
1.62
387--954
36
16.1
36
82
5
640
54
4
21
19
1.62
500--954
29
15.4
29
66
20
124
55
3
20
19
1.59
387--942
143
3.9
143
85
5
675
54
4
21
19
1.62
500--913
22
19.6
21
68
9
126
55
3
21
19
1.59
984--1057
24
3.1
25
77
9
84
48
4
21
25
1.67
951--1055
54
2.1
51
84
12
137
46
3
22
26
1.69
1112--1181
24
2.8
25
84
6
88
55
7
18
18
1.64
1112--1181
26
2.8
25
86
6
88
55
7
18
18
1.64

Tables:   1

The End!