Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002884.1 Corchorus capsularis cultivar CVL-1 contig02892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2742

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
970--1046
27
2.7
29
82
6
104
48
24
10
16
1.78
1267--1693
63
7.0
63
82
7
480
40
15
19
23
1.90
1267--1684
187
2.3
180
81
9
487
40
16
20
23
1.91
1403--1693
127
2.3
126
90
2
381
41
16
19
22
1.90
1403--1756
127
2.8
128
85
4
357
41
16
18
22
1.90
1924--2061
69
2.0
69
89
0
213
36
23
20
20
1.95
2009--2159
49
3.1
49
89
0
221
35
24
17
22
1.95
2113--2302
71
2.7
72
94
0
328
37
22
16
22
1.93
2282--2389
36
3.0
36
78
2
119
40
25
15
17
1.89

Tables:   1

The End!