Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000029.1 Corchorus capsularis cultivar CVL-1 contig00029, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1022

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--132
38
3.5
37
80
3
138
52
6
15
25
1.68
51--164
40
2.9
40
83
10
130
50
7
17
25
1.71
289--359
14
5.5
14
71
19
55
56
1
21
21
1.50
311--420
35
3.1
35
80
13
95
56
1
20
21
1.51
404--550
22
6.8
22
75
10
106
51
6
20
21
1.69
399--712
21
15.7
21
69
16
125
50
6
21
21
1.71
480--537
15
3.9
15
72
19
50
55
0
18
25
1.43
502--691
35
5.1
35
83
9
227
50
5
22
22
1.70
488--635
71
2.1
70
87
3
215
52
4
20
22
1.64
508--648
71
2.0
71
94
0
246
51
6
19
21
1.69
425--712
42
7.3
41
74
15
166
49
6
22
21
1.72
774--820
13
3.5
13
72
16
51
61
0
27
10
1.29
779--829
11
4.3
11
76
23
50
62
0
25
11
1.29

Tables:   1

The End!