Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002929.1 Corchorus capsularis cultivar CVL-1 contig02937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8416

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
307--450
71
2.0
73
94
2
256
46
7
17
28
1.75
5582--5678
47
2.1
47
96
0
176
34
7
7
51
1.57
6213--6338
67
1.9
65
88
6
191
30
14
10
44
1.78
7277--7315
6
6.7
6
85
5
53
30
48
20
0
1.50
7458--7529
31
2.3
31
73
4
74
26
5
11
56
1.55
8033--8087
23
2.4
23
87
6
76
30
43
23
1
1.64
8076--8149
15
4.8
16
86
6
107
40
37
14
6
1.73
8076--8149
31
2.4
31
90
0
121
40
37
14
6
1.73

Tables:   1

The End!