Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000293.1 Corchorus capsularis cultivar CVL-1 contig00293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18669

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1076--1108
2
16.5
2
100
0
66
48
0
0
51
1.00
1585--1752
83
2.0
83
98
0
327
34
19
19
27
1.95
4272--4296
7
3.6
7
100
0
50
0
12
0
88
0.53
7009--7087
39
2.0
39
100
0
158
36
20
15
27
1.92
7011--7073
20
3.2
20
66
20
60
38
20
15
25
1.92
8762--8786
7
3.6
7
100
0
50
0
12
0
88
0.53
12190--12218
6
5.0
6
91
8
51
86
0
13
0
0.58
13266--13310
21
2.1
21
83
0
54
17
31
11
40
1.85
13658--13743
33
2.6
31
79
16
86
10
41
34
12
1.78
13786--13991
32
6.4
32
90
1
279
15
28
39
16
1.89
13786--13997
96
2.2
96
90
1
327
15
27
40
16
1.89
16559--16970
204
2.1
201
85
5
548
28
16
16
37
1.91

Tables:   1

The End!