Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000295.1 Corchorus capsularis cultivar CVL-1 contig00295, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1398

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
413--467
23
2.2
24
81
12
67
25
16
18
40
1.91
429--474
23
2.0
23
100
0
92
21
17
17
43
1.88
666--752
26
3.2
26
65
25
72
48
6
18
26
1.73
650--1025
55
6.8
55
95
0
612
47
7
19
25
1.76
975--1111
71
1.9
72
89
1
213
48
6
16
27
1.71
983--1117
34
3.9
34
72
14
105
49
6
16
27
1.70
1056--1117
16
3.8
15
76
17
61
50
8
16
25
1.72

Tables:   1

The End!