Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000303.1 Corchorus capsularis cultivar CVL-1 contig00303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9090

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1795--2375
22
26.5
22
69
14
188
36
15
9
38
1.80
2455--2671
22
9.8
22
71
13
94
33
13
10
41
1.79
2748--2895
22
6.7
22
75
16
112
39
17
8
34
1.81
2981--3059
22
3.6
22
75
13
81
34
13
13
37
1.85
2979--3078
44
2.3
43
83
8
121
35
16
12
37
1.85
3277--3315
20
2.0
20
85
10
53
64
2
5
28
1.28
6698--6757
29
2.1
29
96
0
111
38
30
1
30
1.67

Tables:   1

The End!