Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000305.1 Corchorus capsularis cultivar CVL-1 contig00305, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8953

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
760--790
8
3.8
8
95
4
53
77
0
22
0
0.77
3657--3708
25
2.0
26
82
10
63
53
17
3
25
1.60
4508--4552
16
2.9
15
87
9
56
40
6
4
48
1.49
5313--5353
21
2.0
21
95
0
73
34
34
12
19
1.89
7533--7657
23
5.6
23
78
12
93
38
12
8
40
1.75
8314--8405
38
2.5
37
82
3
121
51
8
22
17
1.73

Tables:   1

The End!