Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003061.1 Corchorus capsularis cultivar CVL-1 contig03069, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1168

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168--451
22
13.1
22
71
16
121
35
15
8
39
1.79
44--946
44
20.9
43
67
17
247
34
16
9
38
1.82
181--304
45
2.8
46
84
6
148
37
14
8
39
1.76
555--614
22
2.7
23
82
5
63
33
15
10
41
1.80
574--630
22
2.6
22
91
0
87
31
14
8
45
1.75
663--748
22
3.8
21
77
13
66
30
13
11
44
1.80
807--1168
22
16.5
21
69
15
150
35
18
9
35
1.83
990--1077
24
3.8
23
76
8
72
39
18
9
32
1.82

Tables:   1

The End!