Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003231.1 Corchorus capsularis cultivar CVL-1 contig03239, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2283

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
856--1188
35
9.5
35
87
1
418
35
18
18
27
1.94
1031--1682
70
9.0
71
82
9
627
33
21
17
28
1.96
1137--1353
35
6.2
35
95
0
344
35
20
16
27
1.94
827--1682
105
8.0
105
81
10
594
33
20
17
28
1.96
1337--1369
16
2.1
16
100
0
66
33
12
30
24
1.91
1302--1404
51
2.0
51
98
0
197
33
18
23
25
1.97
1267--1439
86
2.0
86
94
0
301
33
19
20
26
1.96
1353--1678
35
9.2
35
91
2
526
30
23
17
29
1.97
1137--1678
142
3.7
142
84
9
718
32
22
17
28
1.96

Tables:   1

The End!