Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003233.1 Corchorus capsularis cultivar CVL-1 contig03241, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1086

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
613--725
58
1.9
58
85
0
154
43
9
21
25
1.83
758--1056
14
21.1
14
67
17
120
45
6
20
27
1.76
758--872
22
5.2
22
66
15
67
43
4
22
29
1.72
758--887
44
3.0
43
82
4
145
43
5
22
29
1.75
997--1068
30
2.5
30
86
4
94
43
5
19
31
1.74
953--1086
22
6.1
22
69
11
69
44
5
22
27
1.74
1019--1068
14
3.4
15
74
20
52
48
2
18
32
1.59

Tables:   1

The End!