Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003251.1 Corchorus capsularis cultivar CVL-1 contig03259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1417

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
360--413
15
3.8
15
73
14
51
16
24
5
53
1.64
391--499
43
2.5
45
78
11
120
21
22
6
50
1.71
394--550
21
7.4
21
68
11
81
21
22
7
49
1.73
337--569
22
10.6
21
68
18
93
20
20
6
52
1.69
746--1053
55
5.6
55
90
0
445
26
19
6
47
1.73
747--1053
166
1.8
166
87
0
461
27
19
6
47
1.73
746--1048
111
2.7
110
89
1
444
27
20
5
46
1.73

Tables:   1

The End!