Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000330.1 Corchorus capsularis cultivar CVL-1 contig00330, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1290

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24--295
22
12.5
22
74
13
172
42
9
14
33
1.78
58--799
44
16.9
44
69
15
263
39
9
16
35
1.80
376--423
19
2.5
19
89
3
69
43
10
20
25
1.83
414--817
22
18.4
22
70
12
154
40
8
15
35
1.78
650--707
23
2.5
23
88
0
80
39
5
12
43
1.64
696--854
22
7.1
22
77
8
108
33
9
18
38
1.83
965--1271
22
13.8
21
70
16
140
40
9
15
34
1.80
1103--1287
44
4.2
44
75
4
171
43
8
14
34
1.76
1124--1271
66
2.2
66
80
2
163
40
9
14
35
1.79

Tables:   1

The End!