Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003304.1 Corchorus capsularis cultivar CVL-1 contig03312, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1000

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--84
15
4.2
15
73
20
60
58
4
14
22
1.54
101--383
21
14.3
21
67
21
125
51
7
20
20
1.70
88--395
43
7.7
44
77
14
198
50
7
20
21
1.71
157--219
15
4.3
15
66
22
53
57
3
19
20
1.54
192--375
35
5.0
35
83
9
224
50
7
20
21
1.72
192--331
71
2.0
71
94
0
244
51
7
20
20
1.72
250--282
14
2.3
15
85
15
52
48
6
24
21
1.72
278--311
14
2.3
15
90
5
52
55
5
14
23
1.61
293--395
42
2.5
41
77
4
116
49
7
22
20
1.74
458--504
13
3.5
13
72
16
51
61
0
25
12
1.31
449--511
27
2.3
28
83
5
94
61
0
20
17
1.34

Tables:   1

The End!