Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003331.1 Corchorus capsularis cultivar CVL-1 contig03339, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1205

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
159--504
37
9.4
37
74
12
282
24
17
14
43
1.87
140--501
74
4.9
74
88
2
523
24
17
14
43
1.87
653--768
43
2.7
43
82
9
130
40
18
6
34
1.77
658--1064
150
2.7
147
90
4
590
39
19
7
33
1.80
780--835
28
2.0
27
86
3
76
39
21
10
28
1.87
886--969
35
2.4
35
80
7
98
42
16
9
30
1.80
932--986
28
2.0
28
85
0
74
34
23
12
29
1.92
960--1105
42
3.5
42
93
0
249
36
22
8
32
1.84

Tables:   1

The End!