Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003346.1 Corchorus capsularis cultivar CVL-1 contig03354, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6128

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3008--3097
23
3.9
21
75
16
63
7
6
21
64
1.43
3011--3096
11
7.4
11
78
10
64
8
6
20
63
1.45
3082--3216
59
2.3
59
93
1
227
10
5
20
63
1.46
3085--3205
35
3.8
34
66
28
86
11
5
21
61
1.51
3008--3214
12
17.6
12
71
8
95
9
6
21
62
1.47
3200--3268
11
6.2
11
80
9
59
13
2
15
68
1.33
3179--3270
22
4.2
23
84
9
129
11
3
18
66
1.37
4536--4560
10
2.5
10
100
0
50
28
24
12
36
1.91
5583--5668
30
2.9
30
68
14
79
38
17
5
38
1.74

Tables:   1

The End!