Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003350.1 Corchorus capsularis cultivar CVL-1 contig03358, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1005

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73--132
31
1.9
32
90
6
97
31
20
3
45
1.67
158--206
15
3.5
15
68
21
52
34
8
0
57
1.29
334--370
19
1.9
19
89
10
58
29
5
0
64
1.15
536--719
22
8.3
22
77
11
169
33
8
19
39
1.82
755--880
22
5.7
22
75
10
114
34
9
19
36
1.85
755--894
44
3.2
44
74
10
126
35
8
20
35
1.83

Tables:   1

The End!