Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003367.1 Corchorus capsularis cultivar CVL-1 contig03375, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4518

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
780--806
2
13.5
2
100
0
54
48
0
0
51
1.00
2726--2954
97
2.4
96
80
7
232
32
27
20
18
1.96
2992--3364
22
16.9
22
75
7
290
35
14
17
32
1.90
2992--3604
44
14.1
42
72
12
327
37
14
18
30
1.90
3093--3350
89
2.9
89
85
4
272
37
14
14
32
1.87
3418--3628
22
9.7
22
75
12
150
39
12
17
30
1.86
3370--3622
65
3.9
67
79
9
190
39
12
18
29
1.87

Tables:   1

The End!