Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000034.1 Corchorus capsularis cultivar CVL-1 contig00034, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3997

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2145--2218
29
2.5
30
88
4
105
28
17
13
40
1.87
2332--2411
29
2.7
29
86
3
97
41
12
17
28
1.86
3276--3324
15
3.4
14
78
13
55
61
0
0
38
0.96
3905--3948
23
2.0
23
86
8
65
25
13
4
56
1.56

Tables:   1

The End!