Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003418.1 Corchorus capsularis cultivar CVL-1 contig03426, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2245

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--37
2
17.0
2
100
0
68
50
0
0
50
1.00
977--1042
31
2.1
31
86
5
89
27
18
4
50
1.66
1142--1218
38
2.1
35
88
7
109
12
16
12
57
1.66
1355--1392
19
2.0
20
85
15
53
28
5
2
63
1.30
1559--1643
22
3.9
22
68
10
66
34
10
18
36
1.86
1651--1698
22
2.2
22
84
0
60
27
6
25
41
1.79
1808--1863
22
2.6
22
86
8
80
39
3
17
39
1.67
1930--2140
22
9.6
22
72
9
92
40
9
15
34
1.80
1970--2026
24
2.5
23
85
5
71
35
10
15
38
1.82
2063--2111
21
2.3
21
89
0
80
42
8
12
36
1.72

Tables:   1

The End!