Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003419.1 Corchorus capsularis cultivar CVL-1 contig03427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1821

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44--184
22
6.3
22
69
6
86
32
8
20
38
1.83
295--599
22
13.8
21
66
18
95
39
10
16
34
1.82
416--626
22
9.6
22
72
9
92
40
9
15
34
1.80
549--597
21
2.3
21
89
0
80
42
8
12
36
1.72
706--755
19
2.5
20
87
6
75
46
12
18
24
1.82
767--838
22
3.3
20
81
14
81
44
11
16
27
1.82
697--838
66
2.2
61
75
10
144
42
9
19
28
1.83
767--863
44
2.2
44
80
7
108
43
9
16
30
1.79
870--972
23
4.6
22
78
7
91
39
9
14
35
1.79
890--969
23
3.5
23
86
1
108
37
8
15
38
1.78
959--1001
22
2.0
22
85
0
59
32
13
16
37
1.88
1046--1097
22
2.3
23
83
3
61
34
13
13
38
1.84
1612--1638
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!