Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000346.1 Corchorus capsularis cultivar CVL-1 contig00346, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7298

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2340--2374
11
3.3
11
88
4
54
20
2
8
68
1.29
2532--2694
60
2.7
60
87
1
238
37
19
17
26
1.93
2592--2695
31
3.4
30
64
15
79
39
19
16
25
1.91
2727--2888
31
5.4
31
71
16
142
26
17
20
34
1.95
2722--2886
60
2.8
60
89
5
262
26
18
21
34
1.96
3967--4046
38
2.1
37
88
9
117
45
20
3
31
1.68
4452--4482
16
2.0
15
93
6
53
6
3
6
83
0.88

Tables:   1

The End!