Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003490.1 Corchorus capsularis cultivar CVL-1 contig03498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4409

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1747--1895
31
4.8
31
86
1
172
19
22
22
35
1.96
1744--1896
63
2.5
61
87
5
209
18
22
23
35
1.96
1713--1895
94
1.9
94
81
2
215
19
21
22
36
1.96
1707--1904
31
6.4
31
81
3
166
20
22
22
34
1.97
2730--2755
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!