Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003505.1 Corchorus capsularis cultivar CVL-1 contig03513, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6110

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50--88
19
2.1
19
100
0
78
38
5
25
30
1.78
2838--2915
26
3.2
26
63
27
62
53
6
19
20
1.66
2819--3081
96
2.8
96
91
1
431
50
8
17
24
1.73
2819--3081
47
5.5
49
80
6
308
50
8
17
24
1.73
2873--3086
49
4.3
54
74
20
214
49
7
16
25
1.73
3413--3454
21
2.0
21
95
4
77
59
4
16
19
1.54
3549--3599
25
2.0
25
92
0
84
56
0
17
25
1.41
3553--3658
42
2.5
42
80
3
115
50
4
19
24
1.66
3622--3674
16
3.2
16
73
5
52
50
5
18
24
1.68
3580--3703
58
2.1
57
78
11
126
50
4
20
24
1.65
3681--3712
15
2.1
15
94
0
55
62
0
15
21
1.32
4084--4187
33
3.2
32
80
5
118
20
40
28
10
1.85

Tables:   1

The End!