Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003514.1 Corchorus capsularis cultivar CVL-1 contig03522, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8552

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1992--2066
27
2.8
27
87
0
105
18
14
24
42
1.88
7779--7957
43
4.1
43
73
9
150
21
20
5
53
1.64
7866--7947
21
3.8
21
81
3
92
21
19
6
52
1.67
8162--8468
55
5.6
55
90
2
483
24
18
7
49
1.73

Tables:   1

The End!