Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003534.1 Corchorus capsularis cultivar CVL-1 contig03542, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1244

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
879--1106
35
6.5
35
88
1
296
35
18
17
27
1.94
851--1106
105
2.4
105
86
2
370
35
19
17
28
1.94
851--1244
70
5.6
70
85
5
308
34
20
17
27
1.95
1061--1244
35
5.3
35
97
0
341
31
23
16
28
1.96
915--1244
105
3.1
105
85
6
359
33
20
17
27
1.96

Tables:   1

The End!