Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003547.1 Corchorus capsularis cultivar CVL-1 contig03555, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2564

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--88
16
5.3
14
69
25
52
53
3
2
40
1.33
219--284
32
2.1
32
85
5
89
13
36
39
10
1.80
506--545
20
2.0
20
95
0
71
27
20
5
47
1.70
863--930
32
2.1
32
86
0
91
23
10
30
35
1.88
870--949
32
2.5
32
79
0
79
23
8
30
37
1.85
2359--2419
27
2.2
27
94
2
104
54
6
31
8
1.56

Tables:   1

The End!