Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003555.1 Corchorus capsularis cultivar CVL-1 contig03563, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6615

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
696--743
14
3.5
14
71
5
53
52
4
14
29
1.60
699--752
27
2.0
27
96
0
99
50
3
14
31
1.61
1057--1094
11
3.5
11
89
10
51
39
0
2
57
1.12
5851--5902
2
25.5
2
88
3
77
46
3
1
48
1.31
5931--5996
31
2.1
31
86
5
89
25
21
4
48
1.69
6305--6342
20
2.0
20
85
15
53
28
7
2
60
1.38
6445--6521
22
3.4
22
75
10
66
33
11
16
37
1.85

Tables:   1

The End!