Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003609.1 Corchorus capsularis cultivar CVL-1 contig03617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4093

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
946--1045
33
3.1
33
88
2
139
52
4
25
19
1.63
946--1104
32
4.9
32
78
8
142
53
3
23
18
1.61
985--1082
35
2.9
34
75
14
94
57
5
19
18
1.59
1273--1535
7
36.9
7
66
15
74
53
3
22
20
1.59
1253--1548
36
8.5
36
85
8
407
53
2
23
20
1.58
1344--1527
14
12.9
14
74
14
99
53
2
23
20
1.58
1460--1506
20
2.3
21
88
3
69
55
2
23
19
1.54
1538--1761
27
8.0
28
75
12
181
56
3
21
18
1.56
2646--2682
19
2.0
18
89
5
56
40
8
21
29
1.82
2803--2827
10
2.5
10
100
0
50
40
24
8
28
1.83

Tables:   1

The End!