Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003678.1 Corchorus capsularis cultivar CVL-1 contig03686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17803

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40--70
2
15.5
2
100
0
62
48
0
0
51
1.00
1468--1499
4
7.8
4
93
6
55
50
25
0
25
1.50
3998--4043
13
3.4
14
72
22
53
63
4
10
21
1.44
5286--5358
31
2.3
32
86
6
105
30
9
27
32
1.89
5286--5379
31
3.0
31
83
6
93
31
9
28
29
1.89
16924--16950
1
27.0
1
100
0
54
100
0
0
0
0.00

Tables:   1

The End!