Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003693.1 Corchorus capsularis cultivar CVL-1 contig03701, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1271

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--455
55
8.2
55
94
1
694
47
7
19
25
1.76
4--636
110
5.6
111
84
10
791
46
7
19
25
1.76
4--636
165
3.7
165
89
4
937
46
7
19
25
1.76
350--581
126
1.8
126
97
0
437
46
7
20
25
1.77
295--709
181
2.3
181
96
0
758
46
7
20
25
1.76
497--636
26
5.2
26
70
21
108
46
8
20
24
1.78
476--636
55
2.9
55
98
0
304
45
8
20
24
1.79
586--722
71
1.9
72
89
1
213
47
6
18
27
1.73
667--728
16
3.8
15
76
17
61
48
8
17
25
1.75
959--1083
22
5.8
22
73
14
100
54
5
19
20
1.64

Tables:   1

The End!