Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003712.1 Corchorus capsularis cultivar CVL-1 contig03720, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5232

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168--418
101
2.5
102
83
7
316
23
15
21
39
1.92
1749--1779
10
3.2
10
95
4
55
0
6
0
93
0.35
2463--2495
16
2.0
17
88
5
50
30
0
0
69
0.88
3144--3184
21
2.0
21
85
9
57
36
17
9
36
1.82
4733--4775
11
3.9
11
84
0
59
46
6
6
39
1.58
4729--4775
22
2.1
22
92
0
76
46
6
6
40
1.55
4944--4984
21
2.0
21
100
0
82
9
21
4
63
1.44

Tables:   1

The End!