Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003724.1 Corchorus capsularis cultivar CVL-1 contig03732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1036

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
356--714
22
17.0
22
67
21
118
21
20
6
51
1.68
369--427
29
2.0
29
87
6
84
22
16
5
55
1.60
376--468
7
12.7
7
70
7
51
21
19
3
55
1.56
386--556
42
4.0
44
84
6
140
20
22
6
50
1.70
376--446
29
2.4
30
86
9
94
21
19
2
56
1.55
411--558
42
3.5
42
87
4
181
20
22
6
50
1.71
497--770
78
3.5
78
95
0
485
21
20
6
52
1.68
569--770
22
10.1
22
69
21
110
22
19
5
52
1.67
449--787
35
8.6
38
74
18
211
21
20
6
51
1.68
616--737
28
4.6
28
65
20
73
22
19
4
52
1.65
332--770
156
2.8
160
83
8
546
21
20
5
52
1.67
739--797
15
3.8
16
76
8
50
22
18
6
52
1.68
786--878
40
2.3
42
88
7
138
22
19
5
52
1.66
783--917
40
3.4
39
78
11
130
25
19
6
48
1.72

Tables:   1

The End!