Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003748.1 Corchorus capsularis cultivar CVL-1 contig03756, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2507

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89--133
20
2.3
19
82
14
56
68
4
2
24
1.19
712--917
22
9.4
22
68
3
74
40
13
10
35
1.78
706--844
66
2.1
65
79
9
147
39
12
10
37
1.78
1183--1245
16
4.0
16
83
2
83
7
14
39
38
1.75
1183--1245
32
2.0
31
90
3
99
7
14
39
38
1.75
1256--1304
23
2.2
22
82
13
57
6
24
40
28
1.79
1738--1809
31
2.3
31
75
17
78
61
8
4
26
1.43
2035--2064
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!