Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003772.1 Corchorus capsularis cultivar CVL-1 contig03780, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1095

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
317--437
22
5.5
21
73
14
84
37
15
13
33
1.87
293--437
66
2.2
66
86
3
193
38
15
12
33
1.85
314--453
44
3.2
43
79
9
133
36
16
12
34
1.87
293--549
66
3.9
66
74
11
181
39
16
10
33
1.83
589--646
22
2.6
22
83
5
64
29
27
1
41
1.66
694--763
22
3.2
22
72
0
68
32
11
12
42
1.79

Tables:   1

The End!