Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003787.1 Corchorus capsularis cultivar CVL-1 contig03795, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1186

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114--206
40
2.3
42
85
7
120
54
6
17
21
1.64
222--505
22
13.1
22
76
12
212
51
5
21
21
1.69
222--685
65
7.4
65
74
14
305
51
6
21
21
1.68
321--603
43
6.1
44
67
24
127
51
6
20
21
1.69
298--375
36
2.1
37
86
6
106
52
3
21
21
1.63
407--540
35
3.6
35
73
19
126
52
5
19
22
1.67
416--577
78
2.1
78
98
0
315
51
6
20
21
1.69
516--606
21
4.3
21
84
6
121
48
7
23
20
1.75
516--619
42
2.4
43
93
1
174
50
7
22
20
1.73
374--680
63
5.0
59
74
13
176
52
6
19
21
1.68
623--693
29
2.4
29
86
9
92
56
2
19
21
1.55
516--710
22
8.9
22
71
10
69
52
6
20
20
1.69

Tables:   1

The End!