Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003798.1 Corchorus capsularis cultivar CVL-1 contig03806, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1191

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
357--405
23
2.1
24
84
3
64
26
4
2
67
1.19
416--711
86
3.6
84
83
9
403
33
16
6
43
1.73
416--711
162
1.8
162
91
4
490
33
16
6
43
1.73
554--743
86
2.2
85
83
10
260
32
12
4
50
1.61
1152--1186
2
18.0
2
94
5
63
51
0
0
48
1.00

Tables:   1

The End!