Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003803.1 Corchorus capsularis cultivar CVL-1 contig03811, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1923

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212--296
22
3.8
22
66
14
57
37
14
9
38
1.78
337--461
22
5.7
22
75
9
103
32
15
9
42
1.79
313--505
44
4.4
44
73
14
143
34
12
8
43
1.74
356--503
66
2.3
66
81
5
167
35
12
8
43
1.74
400--533
22
6.0
22
72
16
114
36
12
8
41
1.75
1157--1256
4
25.5
4
70
25
72
28
1
2
69
1.06
1167--1268
13
8.5
13
71
22
89
29
1
1
66
1.13
1157--1278
59
2.1
59
93
3
210
28
2
2
66
1.17
1157--1248
17
5.2
17
79
17
98
28
1
2
68
1.08
1255--1294
21
1.9
21
84
0
53
30
7
5
57
1.48

Tables:   1

The End!